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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6003555 chr22:23554311 A/G EIF4ENIF1 chr22:31832963-31892094:- -0.58 -5.97 4.57E-9 Box Plot
THCA rs6003555 chr22:23554311 A/G KLHL22 chr22:20795806-20850170:- -0.55 -5.92 6.02E-9 Box Plot
THCA rs6003555 chr22:23554311 A/G NCAPH2 chr22:50946645-50961901:+ -0.53 -5.97 4.68E-9 Box Plot
THCA rs6003555 chr22:23554311 A/G PPIL2 chr22:22020298-22054304:+ -0.6 -6.41 3.5E-10 Box Plot
THCA rs6003555 chr22:23554311 A/G ZNF74 chr22:20748405-20762751:+ -0.65 -6.03 3.19E-9 Box Plot
THCA rs6003820 chr22:23988257 T/C IGLL3 chr22:25713888-25716191:+ 0.59 12.25 3.42E-30 Box Plot
THCA rs6003823 chr22:23991420 A/G IGLL3 chr22:25713888-25716191:+ -0.59 -12.24 3.8E-30 Box Plot
THCA rs6003828 chr22:23994026 G/A IGLL3 chr22:25713888-25716191:+ 0.66 9.65 2.94E-20 Box Plot
THCA rs6003847 chr22:24047657 G/T IGLL3 chr22:25713888-25716191:+ 0.55 8.4 5.16E-16 Box Plot
THCA rs60042256 chr3:88321888 AT/A MANEAL chr1:38259474-38266809:+ 0.32 5.9 7.01E-9 Box Plot
THCA rs6005113 chr22:27037014 C/T ACO2 chr22:41865129-41924993:+ -0.7 -8.89 1.23E-17 Box Plot
THCA rs6005113 chr22:27037014 C/T ADRBK2 chr22:25960816-26125261:+ -0.72 -6.92 1.47E-11 Box Plot
THCA rs6005113 chr22:27037014 C/T ADSL chr22:40742504-40786467:+ -0.93 -11.23 3.92E-26 Box Plot
THCA rs6005113 chr22:27037014 C/T ALG12 chr22:50293877-50312106:- -0.69 -8.66 7.45E-17 Box Plot
THCA rs6005113 chr22:27037014 C/T ANKRD54 chr22:38226862-38245334:- -0.82 -10.36 7.83E-23 Box Plot